Variant report

Variant	rs73248877
Chromosome Location	chr5:113059112-113059113
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs56121036	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57295502	1.00[AMR][1000 genomes]
rs58203814	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60321322	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6879431	1.00[AMR][1000 genomes]
rs6895014	1.00[AMR][1000 genomes]
rs6895838	1.00[AMR][1000 genomes]
rs73240242	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73246999	1.00[AMR][1000 genomes]
rs73247338	1.00[AMR][1000 genomes]
rs73248814	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73248820	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73248861	1.00[AMR][1000 genomes]
rs73248875	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73250340	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73250348	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73250351	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73250358	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73250361	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:113058000-113059600	Enhancers	Fetal Kidney	kidney
2	chr5:113058000-113059600	Enhancers	Fetal Stomach	stomach
3	chr5:113058200-113059200	Enhancers	Rectal Smooth Muscle	rectum
4	chr5:113058200-113059600	Enhancers	Fetal Lung	lung
5	chr5:113058200-113059600	Enhancers	Stomach Smooth Muscle	stomach
6	chr5:113058400-113059200	Enhancers	Duodenum Smooth Muscle	Duodenum
7	chr5:113058400-113059600	Enhancers	Colon Smooth Muscle	Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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