Variant report
| Variant | rs73260755 |
|---|---|
| Chromosome Location | chr10:44128209-44128210 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:4)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:4 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr10:44100401..44102576-chr10:44125762..44128541,3 | MCF-7 | breast: | |
| 2 | chr10:44119832..44124930-chr10:44125524..44130562,5 | K562 | blood: | |
| 3 | chr10:44128188..44131852-chr10:44142635..44145669,3 | MCF-7 | breast: | |
| 4 | chr10:44127498..44129777-chr10:44131892..44134124,2 | K562 | blood: |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000169740 | Chromatin interaction |
| ENSG00000198298 | Chromatin interaction |
| ENSG00000223910 | Chromatin interaction |
| ENSG00000232004 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:10)
| rs_ID | r2[population] |
|---|---|
| rs17154123 | 1.00[AMR][1000 genomes] |
| rs41422044 | 1.00[AMR][1000 genomes] |
| rs56908285 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs58627507 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73260746 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73260748 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73260750 | 0.89[AFR][1000 genomes] |
| rs73260756 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73260769 | 0.81[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs872533 | 1.00[AMR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
