Variant report

Variant	rs73265874
Chromosome Location	chr10:44312421-44312422
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs58440555	1.00[AFR][1000 genomes]
rs58605440	1.00[AFR][1000 genomes]
rs7080468	0.87[AFR][1000 genomes]
rs73266583	1.00[AFR][1000 genomes]
rs73268410	0.87[AFR][1000 genomes]
rs73268427	1.00[AFR][1000 genomes]
rs73268446	1.00[AFR][1000 genomes]
rs73268468	1.00[AFR][1000 genomes]
rs73268474	1.00[AFR][1000 genomes]
rs73268480	1.00[AFR][1000 genomes]
rs73268484	1.00[AFR][1000 genomes]
rs73270332	1.00[AFR][1000 genomes]
rs73270342	1.00[AFR][1000 genomes]
rs73270344	1.00[AFR][1000 genomes]
rs73270346	1.00[AFR][1000 genomes]
rs73270349	1.00[AFR][1000 genomes]
rs73275923	1.00[AFR][1000 genomes]
rs73275932	1.00[AFR][1000 genomes]
rs73275938	1.00[AFR][1000 genomes]
rs73275945	1.00[AFR][1000 genomes]
rs73275947	1.00[AFR][1000 genomes]
rs73275964	1.00[AFR][1000 genomes]
rs73275968	1.00[AFR][1000 genomes]
rs73275969	1.00[AFR][1000 genomes]
rs73275979	1.00[AFR][1000 genomes]
rs73276532	1.00[AFR][1000 genomes]
rs73276558	1.00[AFR][1000 genomes]
rs73276559	1.00[AFR][1000 genomes]
rs73276560	1.00[AFR][1000 genomes]
rs73277923	0.87[AFR][1000 genomes]
rs7904663	1.00[AFR][1000 genomes]
rs7921743	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049266	chr10:44296893-44323365	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:56 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44306800-44318400	Weak transcription	Fetal Lung	lung
2	chr10:44309400-44313400	Enhancers	NHDF-Ad	bronchial
3	chr10:44309600-44313400	Enhancers	NHLF	lung
4	chr10:44309800-44312800	Enhancers	NH-A	brain
5	chr10:44309800-44314800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
6	chr10:44310000-44313400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
7	chr10:44310200-44313400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr10:44310400-44313000	Enhancers	Fetal Thymus	thymus
9	chr10:44310400-44313400	Enhancers	Primary T helper naive cells from peripheral blood	blood
10	chr10:44310600-44313000	Enhancers	Primary hematopoietic stem cells	blood
11	chr10:44310600-44313000	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr10:44310600-44313400	Enhancers	Primary T killer memory cells from peripheral blood	blood
13	chr10:44310800-44312600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
14	chr10:44310800-44313400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
15	chr10:44311000-44313000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr10:44311000-44313400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr10:44311000-44314000	Enhancers	Left Ventricle	heart
18	chr10:44311000-44314600	Enhancers	Primary T cells fromperipheralblood	blood
19	chr10:44311000-44314600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
20	chr10:44311200-44312800	Enhancers	Fetal Muscle Leg	muscle
21	chr10:44311200-44313200	Enhancers	Placenta Amnion	Placenta Amnion
22	chr10:44311200-44313800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr10:44311400-44312600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr10:44311600-44312600	Enhancers	Adipose Nuclei	Adipose
25	chr10:44311600-44312800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr10:44311600-44317800	Weak transcription	Aorta	Aorta
27	chr10:44311800-44312600	Enhancers	Primary B cells from peripheral blood	blood
28	chr10:44311800-44312800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr10:44311800-44312800	Enhancers	Colon Smooth Muscle	Colon
30	chr10:44311800-44312800	Enhancers	Fetal Stomach	stomach
31	chr10:44311800-44312800	Enhancers	Thymus	Thymus
32	chr10:44311800-44313200	Flanking Active TSS	Fetal Heart	heart
33	chr10:44311800-44313400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
34	chr10:44311800-44313400	Enhancers	Placenta	Placenta
35	chr10:44311800-44313400	Enhancers	Right Atrium	heart
36	chr10:44311800-44313400	Enhancers	Right Ventricle	heart
37	chr10:44312000-44312600	Enhancers	Ovary	ovary
38	chr10:44312000-44312800	Enhancers	Duodenum Mucosa	Duodenum
39	chr10:44312000-44313000	Flanking Active TSS	Dnd41	blood
40	chr10:44312200-44312600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
41	chr10:44312200-44312600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
42	chr10:44312200-44312600	Enhancers	Small Intestine	intestine
43	chr10:44312200-44312800	Enhancers	Skeletal Muscle Male	skeletal muscle
44	chr10:44312200-44313400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr10:44312200-44313400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
46	chr10:44312200-44314600	Enhancers	Primary T cells from cord blood	blood
47	chr10:44312200-44314600	Enhancers	Primary T helper cells PMA-I stimulated	--
48	chr10:44312400-44312600	Enhancers	Rectal Mucosa Donor 29	rectum
49	chr10:44312400-44312600	Flanking Active TSS	Stomach Smooth Muscle	stomach
50	chr10:44312400-44313000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--

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