Variant report
| Variant | rs73268333 |
|---|---|
| Chromosome Location | chr8:96290296-96290297 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000253773 | Chromatin interaction |
| ENSG00000156172 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:7)
| rs_ID | r2[population] |
|---|---|
| rs60219110 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs61601218 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73266468 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73266470 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73266472 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73266479 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73266483 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv1023866 | chr8:96273255-96306378 | Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 25 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
