Variant report

Variant	rs73270225
Chromosome Location	chr10:44434110-44434111
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs58158527	1.00[AMR][1000 genomes]
rs61734969	1.00[AMR][1000 genomes]
rs73270224	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73270249	1.00[AMR][1000 genomes]
rs73275984	1.00[AFR][1000 genomes]
rs73275999	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051921	chr10:44378011-44458880	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44422800-44437600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:44427200-44434400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr10:44429400-44434400	Weak transcription	Right Atrium	heart
4	chr10:44434000-44434200	Enhancers	Fetal Muscle Trunk	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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