Variant report

Variant	rs73270249
Chromosome Location	chr10:44457722-44457723
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:44446026..44447976-chr10:44454993..44457895,2	K562	blood:
2	chr10:44453236..44456147-chr10:44456397..44460102,3	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF32-9	chr10:44457648-44457786	NONHSAT013020

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs58158527	1.00[AMR][1000 genomes]
rs61734969	1.00[AMR][1000 genomes]
rs73270224	1.00[AMR][1000 genomes]
rs73270225	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051921	chr10:44378011-44458880	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44437600-44460800	Weak transcription	Gastric	stomach
2	chr10:44453000-44460200	Enhancers	Ovary	ovary
3	chr10:44455000-44460800	Weak transcription	Aorta	Aorta
4	chr10:44455600-44462000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr10:44455800-44460800	Weak transcription	Fetal Heart	heart
6	chr10:44456200-44458400	Enhancers	Fetal Muscle Leg	muscle
7	chr10:44456200-44459400	Weak transcription	Right Ventricle	heart
8	chr10:44456400-44457800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr10:44456400-44459800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr10:44456600-44459800	Enhancers	Pancreas	Pancrea
11	chr10:44456600-44461600	Enhancers	Fetal Kidney	kidney
12	chr10:44456800-44459200	Enhancers	Stomach Smooth Muscle	stomach
13	chr10:44457000-44457800	Enhancers	Skeletal Muscle Male	skeletal muscle
14	chr10:44457000-44457800	Bivalent Enhancer	NHDF-Ad	bronchial
15	chr10:44457000-44459200	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr10:44457200-44458200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr10:44457200-44458200	Enhancers	Colonic Mucosa	Colon
18	chr10:44457200-44458200	Bivalent Enhancer	Fetal Muscle Trunk	muscle
19	chr10:44457200-44458200	Enhancers	Skeletal Muscle Female	skeletal muscle
20	chr10:44457200-44458200	Enhancers	Spleen	Spleen
21	chr10:44457200-44461200	Enhancers	Fetal Stomach	stomach
22	chr10:44457400-44458200	Enhancers	Lung	lung
23	chr10:44457400-44459600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
24	chr10:44457600-44459000	Weak transcription	Right Atrium	heart
25	chr10:44457600-44459400	Weak transcription	Left Ventricle	heart
26	chr10:44457600-44460000	Weak transcription	Osteobl	bone

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