Variant report

Variant	rs73274414
Chromosome Location	chr12:41753874-41753875
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11180190	1.00[AMR][1000 genomes]
rs73268706	1.00[AMR][1000 genomes]
rs73272632	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73272637	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73272682	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73272698	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73274490	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832383	chr12:41693298-41846934	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
2	nsv826348	chr12:41752718-41754247	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:41749600-41755400	Weak transcription	Brain Germinal Matrix	brain
2	chr12:41749800-41755200	Weak transcription	Colon Smooth Muscle	Colon

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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