Variant report

Variant	rs73276128
Chromosome Location	chr12:41820444-41820445
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11180903	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11180913	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11180917	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1458162	0.81[AFR][1000 genomes]
rs58719598	1.00[AMR][1000 genomes]
rs59015177	1.00[AMR][1000 genomes]
rs59108550	1.00[AMR][1000 genomes]
rs59661256	1.00[AMR][1000 genomes]
rs73270902	1.00[AMR][1000 genomes]
rs73274449	1.00[AMR][1000 genomes]
rs73274454	1.00[AMR][1000 genomes]
rs73274455	1.00[AMR][1000 genomes]
rs73274457	1.00[AMR][1000 genomes]
rs73274468	1.00[AMR][1000 genomes]
rs73274472	1.00[AMR][1000 genomes]
rs73276105	1.00[AMR][1000 genomes]
rs73276107	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832383	chr12:41693298-41846934	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
2	nsv832384	chr12:41772648-41971430	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv2755020	chr12:41780758-41820936	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	n/a
4	nsv1037987	chr12:41815867-41840251	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:41818000-41820600	Enhancers	Pancreatic Islets	Pancreatic Islet

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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