Variant report

Variant	rs73285220
Chromosome Location	chr12:45869600-45869601
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs59494087	1.00[AFR][1000 genomes]
rs73285232	1.00[AFR][1000 genomes]
rs73285268	1.00[AFR][1000 genomes]
rs73285270	1.00[AFR][1000 genomes]
rs73285296	1.00[AFR][1000 genomes]
rs73286941	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832395	chr12:45841765-46039297	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:45865200-45870600	Weak transcription	Adipose Nuclei	Adipose
2	chr12:45866600-45870800	Enhancers	Fetal Thymus	thymus
3	chr12:45868000-45870400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr12:45868600-45870600	Enhancers	Thymus	Thymus
5	chr12:45869000-45869600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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