The 2.0 version of rSNPBase

Variant report

Variant rs73288794
Chromosome Location chr12:11890186-11890187
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11873200-11902400 Weak transcription Brain Cingulate Gyrus brain
2 chr12:11873200-11909400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr12:11873400-11894200 Weak transcription NHLF lung
4 chr12:11880400-11896200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr12:11880600-11896400 Weak transcription Fetal Stomach stomach
6 chr12:11880800-11890800 Weak transcription Stomach Smooth Muscle stomach
7 chr12:11882400-11899200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr12:11882400-11902600 Weak transcription Fetal Muscle Leg muscle
9 chr12:11882400-11903200 Weak transcription Fetal Muscle Trunk muscle
10 chr12:11883200-11894400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr12:11883600-11891400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr12:11883600-11891400 Weak transcription Right Ventricle heart
13 chr12:11883600-11894000 Weak transcription H9 Cell Line embryonic stem cell
14 chr12:11883600-11896200 Weak transcription Colon Smooth Muscle Colon
15 chr12:11883800-11906000 Weak transcription Liver Liver
16 chr12:11884000-11894000 Weak transcription Right Atrium heart
17 chr12:11884000-11894200 Weak transcription Psoas Muscle Psoas
18 chr12:11884200-11896200 Weak transcription Rectal Smooth Muscle rectum
19 chr12:11884200-11899000 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr12:11884800-11893800 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr12:11885200-11890400 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr12:11885200-11891400 Weak transcription NHEK skin
23 chr12:11885200-11891600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr12:11885200-11894200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr12:11885200-11894200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr12:11885200-11894200 Weak transcription Osteobl bone
27 chr12:11885200-11906200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr12:11885400-11891400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr12:11885600-11892000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr12:11885600-11894200 Weak transcription Esophagus oesophagus
31 chr12:11885600-11898600 Weak transcription Primary T cells from cord blood blood
32 chr12:11885600-11899000 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr12:11885600-11905200 Weak transcription Fetal Intestine Large intestine
34 chr12:11885800-11890600 Weak transcription HUVEC blood vessel
35 chr12:11885800-11893800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr12:11885800-11893800 Weak transcription HMEC breast
37 chr12:11885800-11894200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr12:11885800-11894200 Weak transcription Gastric stomach
39 chr12:11885800-11896800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr12:11885800-11898400 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr12:11885800-11911600 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr12:11886000-11894200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr12:11886000-11900000 Weak transcription Colonic Mucosa Colon
44 chr12:11886200-11890200 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr12:11886200-11892400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr12:11886200-11892600 Genic enhancers GM12878-XiMat blood
47 chr12:11886600-11892400 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr12:11886800-11892800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr12:11886800-11897800 Genic enhancers Primary hematopoietic stem cells short term culture blood
50 chr12:11887000-11890800 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015