Variant report

Variant	rs7329703
Chromosome Location	chr13:47694801-47694802
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:47692441..47695148-chr13:47703321..47704866,2	K562	blood:
2	chr13:47692708..47695817-chr13:47696869..47700043,3	K562	blood:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs2802403	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8001526	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9567787	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2763019	chr13:47348229-48123447	Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
2	esv3394678	chr13:47678184-48039379	Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:47683800-47695200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr13:47686600-47695200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr13:47688200-47695800	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr13:47688800-47695600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr13:47690600-47695800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr13:47692000-47695400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr13:47692600-47695200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr13:47693200-47695800	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chr13:47693200-47696000	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr13:47693400-47695000	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr13:47693800-47696000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr13:47694000-47695800	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr13:47694200-47696000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr13:47694400-47695600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr13:47694400-47695800	Enhancers	Fetal Stomach	stomach
16	chr13:47694600-47695000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr13:47694600-47695400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr13:47694600-47695600	Weak transcription	HUES48 Cell Line	embryonic stem cell
19	chr13:47694600-47696000	Enhancers	Breast Myoepithelial Primary Cells	Breast
20	chr13:47694600-47696200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr13:47694600-47696200	Enhancers	K562	blood
22	chr13:47694800-47695400	Weak transcription	Brain Cingulate Gyrus	brain
23	chr13:47694800-47695600	Enhancers	H9 Cell Line	embryonic stem cell
24	chr13:47694800-47696000	Enhancers	NHEK	skin

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