The 2.0 version of rSNPBase

Variant report

Variant rs73300649
Chromosome Location chr12:48055066-48055067
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:48007400-48055400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr12:48015600-48055200 Weak transcription Placenta Amnion Placenta Amnion
3 chr12:48029400-48055400 Weak transcription Thymus Thymus
4 chr12:48029800-48098800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr12:48031000-48083200 Weak transcription Esophagus oesophagus
6 chr12:48031400-48058400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr12:48036600-48055400 Weak transcription Ovary ovary
8 chr12:48038200-48059400 Weak transcription Small Intestine intestine
9 chr12:48039400-48058400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr12:48040600-48086000 Weak transcription Fetal Brain Male brain
11 chr12:48042200-48058400 Weak transcription Fetal Muscle Trunk muscle
12 chr12:48042400-48060200 Weak transcription H9 Cell Line embryonic stem cell
13 chr12:48043400-48080000 Weak transcription NHEK skin
14 chr12:48043800-48055600 Weak transcription Right Ventricle heart
15 chr12:48045000-48055200 Weak transcription NH-A brain
16 chr12:48045200-48059600 Weak transcription HMEC breast
17 chr12:48045200-48060200 Weak transcription Spleen Spleen
18 chr12:48045200-48079200 Weak transcription NHLF lung
19 chr12:48045400-48055800 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr12:48045600-48055800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr12:48045600-48055800 Weak transcription Hela-S3 cervix
22 chr12:48045600-48056600 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr12:48045600-48062200 Weak transcription Stomach Mucosa stomach
24 chr12:48045800-48058200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr12:48045800-48058400 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr12:48046000-48055400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr12:48046000-48058400 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr12:48046200-48055200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr12:48046200-48068000 Weak transcription Brain Hippocampus Middle brain
30 chr12:48046400-48061200 Weak transcription Brain Inferior Temporal Lobe brain
31 chr12:48046600-48055200 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr12:48046600-48055200 Weak transcription Adipose Nuclei Adipose
33 chr12:48046600-48055200 Weak transcription Fetal Brain Female brain
34 chr12:48046600-48055400 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr12:48046600-48057800 Weak transcription Fetal Intestine Small intestine
36 chr12:48046600-48058200 Weak transcription Brain Substantia Nigra brain
37 chr12:48046600-48058400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr12:48046600-48060000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr12:48046600-48060000 Weak transcription Fetal Kidney kidney
40 chr12:48046600-48083000 Weak transcription Rectal Smooth Muscle rectum
41 chr12:48046600-48087800 Weak transcription Muscle Satellite Cultured Cells --
42 chr12:48046600-48090000 Weak transcription Psoas Muscle Psoas
43 chr12:48046600-48097000 Weak transcription Brain Angular Gyrus brain
44 chr12:48046600-48097600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr12:48046600-48099200 Weak transcription Gastric stomach
46 chr12:48046800-48055400 Weak transcription Liver Liver
47 chr12:48046800-48056400 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr12:48046800-48058200 Weak transcription HSMMtube muscle
49 chr12:48046800-48058400 Weak transcription H1 Cell Line embryonic stem cell
50 chr12:48046800-48058400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015