The 2.0 version of rSNPBase

Variant report

Variant rs9738787
Chromosome Location chr12:48022007-48022008
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:47998800-48030800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr12:48007200-48024600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr12:48007400-48041800 Weak transcription HSMMtube muscle
4 chr12:48007400-48044800 Weak transcription Aorta Aorta
5 chr12:48007400-48055400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr12:48007600-48028200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr12:48007600-48032000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr12:48007600-48037600 Weak transcription Left Ventricle heart
9 chr12:48008400-48029000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr12:48008600-48033400 Weak transcription Pancreas Pancrea
11 chr12:48009000-48023600 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr12:48009000-48032200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr12:48009800-48036200 Weak transcription Ovary ovary
14 chr12:48010200-48027800 Weak transcription Muscle Satellite Cultured Cells --
15 chr12:48011600-48029600 Weak transcription HSMM muscle
16 chr12:48012800-48024400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr12:48013000-48024400 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr12:48013000-48025600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr12:48013000-48029000 Weak transcription Primary B cells from cord blood blood
20 chr12:48013200-48024200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr12:48013400-48024200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr12:48013400-48024600 Weak transcription A549 lung
23 chr12:48014200-48025400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr12:48014600-48029200 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr12:48014800-48030600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr12:48015200-48025200 Weak transcription Primary T cells from cord blood blood
27 chr12:48015600-48055200 Weak transcription Placenta Amnion Placenta Amnion
28 chr12:48016000-48044400 Weak transcription NH-A brain
29 chr12:48017000-48024400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr12:48018000-48036800 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr12:48018600-48026000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr12:48018600-48029000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr12:48018800-48028400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr12:48018800-48029000 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr12:48018800-48030600 Weak transcription Fetal Stomach stomach
36 chr12:48019600-48024200 Weak transcription Primary B cells from peripheral blood blood
37 chr12:48019600-48024400 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr12:48020000-48027400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr12:48020800-48024400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr12:48020800-48029800 Weak transcription Fetal Muscle Leg muscle
41 chr12:48021200-48028200 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015