Variant report

Variant	rs73301593
Chromosome Location	chr8:91670926-91670927
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:91658517..91660339-chr8:91670589..91672370,2	K562	blood:
2	chr8:91660550..91662849-chr8:91670707..91673792,3	K562	blood:
3	chr8:91669462..91675137-chr8:91678478..91682798,5	MCF-7	breast:
4	chr8:91669120..91671643-chr8:91681940..91683479,2	K562	blood:
5	chr8:91660550..91663443-chr8:91670612..91673792,3	K562	blood:
6	chr8:91656410..91660388-chr8:91669183..91672370,5	K562	blood:
7	chr8:91656207..91664773-chr8:91669059..91678442,20	MCF-7	breast:
8	chr8:91670143..91672492-chr8:91681979..91683592,2	K562	blood:
9	chr8:91666096..91668399-chr8:91670689..91672510,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000180694	Chromatin interaction
ENSG00000246792	Chromatin interaction

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs10046610	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10046655	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10046723	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10102274	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10103195	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10504897	0.82[AMR][1000 genomes]
rs10504899	0.86[AMR][1000 genomes]
rs10504900	0.82[AMR][1000 genomes]
rs11986094	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11989315	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11994308	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16893366	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16905044	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16905150	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs16905319	0.86[AMR][1000 genomes]
rs16905331	0.82[AMR][1000 genomes]
rs17717748	0.81[AMR][1000 genomes]
rs28394575	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4265146	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4339599	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4500048	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4571698	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59253454	0.82[AMR][1000 genomes]
rs60664481	0.82[AMR][1000 genomes]
rs60690249	0.82[AMR][1000 genomes]
rs61312544	0.82[AMR][1000 genomes]
rs61441737	0.82[AMR][1000 genomes]
rs6471253	0.82[AMR][1000 genomes]
rs6984689	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6994987	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7011031	0.82[AMR][1000 genomes]
rs7011692	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7013400	0.86[AMR][1000 genomes]
rs7017389	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73301574	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73301578	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73301581	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73305518	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73307288	0.82[AMR][1000 genomes]
rs73311066	0.82[AMR][1000 genomes]
rs73311068	0.82[AMR][1000 genomes]
rs73311083	0.82[AMR][1000 genomes]
rs73311086	0.82[AMR][1000 genomes]
rs73311089	0.82[AMR][1000 genomes]
rs73311093	0.86[AMR][1000 genomes]
rs7815900	0.86[AMR][1000 genomes]
rs7823529	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9297885	0.93[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91666800-91677800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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