Variant report

Variant	rs73304859
Chromosome Location	chr8:85195233-85195234
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs1388414	0.80[AFR][1000 genomes]
rs1491554	1.00[EUR][1000 genomes]
rs1491557	1.00[EUR][1000 genomes]
rs1491558	1.00[EUR][1000 genomes]
rs1491559	1.00[EUR][1000 genomes]
rs16912690	0.80[AFR][1000 genomes]
rs16912696	0.80[AFR][1000 genomes]
rs1955255	0.80[AFR][1000 genomes]
rs34319613	0.80[AFR][1000 genomes]
rs5009137	0.80[AFR][1000 genomes]
rs5009138	0.80[AFR][1000 genomes]
rs5009139	0.80[AFR][1000 genomes]
rs5009140	0.80[AFR][1000 genomes]
rs5009141	0.86[AFR][1000 genomes]
rs56952796	0.80[AFR][1000 genomes]
rs57379489	0.80[AFR][1000 genomes]
rs60990495	0.80[AFR][1000 genomes]
rs73291372	0.80[AFR][1000 genomes]
rs73291391	0.80[AFR][1000 genomes]
rs73291401	0.80[AFR][1000 genomes]
rs73291402	0.80[AFR][1000 genomes]
rs73293009	0.80[AFR][1000 genomes]
rs73293011	0.80[AFR][1000 genomes]
rs73293013	0.80[AFR][1000 genomes]
rs73293017	0.80[AFR][1000 genomes]
rs73293094	0.80[AFR][1000 genomes]
rs73293099	0.80[AFR][1000 genomes]
rs73293102	0.80[AFR][1000 genomes]
rs73306921	0.80[AFR][1000 genomes]
rs73306926	0.80[AFR][1000 genomes]
rs73306939	0.81[AFR][1000 genomes]
rs73306943	0.80[AFR][1000 genomes]
rs73306950	0.80[AFR][1000 genomes]
rs73306951	0.80[AFR][1000 genomes]
rs73306954	0.86[AFR][1000 genomes]
rs73306958	0.80[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2753846	chr8:84637092-85239703	Active TSS Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv831374	chr8:85103604-85308976	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:85192200-85198000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links