Variant report

Variant	rs73315539
Chromosome Location	chr8:119871719-119871720
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11573877	1.00[AMR][1000 genomes]
rs11573902	1.00[AMR][1000 genomes]
rs16891571	1.00[AMR][1000 genomes]
rs58081288	1.00[AMR][1000 genomes]
rs60516609	1.00[AMR][1000 genomes]
rs73313889	1.00[AFR][1000 genomes]
rs73315548	1.00[AMR][1000 genomes]
rs73315570	1.00[AMR][1000 genomes]
rs73317506	1.00[AMR][1000 genomes]
rs73319638	1.00[AMR][1000 genomes]
rs73321801	1.00[AMR][1000 genomes]
rs73325451	1.00[AMR][1000 genomes]
rs7818753	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891414	chr8:119755490-119881550	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	nsv831444	chr8:119757355-119915966	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
3	nsv470234	chr8:119856209-119906530	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119866400-119872200	Weak transcription	GM12878-XiMat	blood
2	chr8:119870200-119873400	Weak transcription	Fetal Intestine Small	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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