Variant report

Variant	rs73317043
Chromosome Location	chr8:110586479-110586480
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:110585424..110587583-chr8:110589809..110591603,2	MCF-7	breast:
2	chr8:110585014..110586543-chr8:110656460..110658442,2	MCF-7	breast:
3	chr8:110584567..110587169-chr8:110600122..110601656,2	K562	blood:
4	chr8:110582739..110585482-chr8:110585928..110589559,4	MCF-7	breast:
5	chr8:110585248..110587621-chr8:110594854..110596894,3	MCF-7	breast:
6	chr8:110585332..110587450-chr8:110606815..110608891,2	K562	blood:
7	chr8:110358079..110360287-chr8:110586276..110588279,2	K562	blood:
8	chr8:110586311..110588193-chr8:110645798..110647826,2	MCF-7	breast:
9	chr8:110579303..110581510-chr8:110586051..110587818,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000252559	Chromatin interaction
ENSG00000147642	Chromatin interaction

rs_ID	r²[population]
rs28646154	1.00[EUR][1000 genomes]
rs59024706	0.93[EUR][1000 genomes]
rs73700659	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7838445	0.93[EUR][1000 genomes]
rs7839449	0.93[EUR][1000 genomes]

Chromatin state (count:87 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110553000-110587000	Weak transcription	Esophagus	oesophagus
2	chr8:110553800-110613000	Weak transcription	NHLF	lung
3	chr8:110554000-110589200	Weak transcription	Psoas Muscle	Psoas
4	chr8:110558800-110587800	Weak transcription	Stomach Mucosa	stomach
5	chr8:110563000-110586800	Weak transcription	Spleen	Spleen
6	chr8:110564400-110587200	Weak transcription	Colonic Mucosa	Colon
7	chr8:110565800-110586800	Weak transcription	NHEK	skin
8	chr8:110567000-110593200	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr8:110567800-110587000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr8:110568000-110586800	Weak transcription	Gastric	stomach
11	chr8:110569400-110586600	Weak transcription	Fetal Heart	heart
12	chr8:110570400-110586600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr8:110570400-110586800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr8:110570400-110587000	Weak transcription	Rectal Smooth Muscle	rectum
15	chr8:110570400-110593600	Weak transcription	Fetal Brain Male	brain
16	chr8:110571000-110589200	Weak transcription	Hela-S3	cervix
17	chr8:110571000-110589200	Weak transcription	NH-A	brain
18	chr8:110571600-110591200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
19	chr8:110571600-110592800	Weak transcription	Small Intestine	intestine
20	chr8:110571800-110586800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr8:110572000-110586800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr8:110572000-110586800	Weak transcription	Fetal Intestine Small	intestine
23	chr8:110572000-110586800	Weak transcription	Pancreas	Pancrea
24	chr8:110572000-110587200	Weak transcription	Fetal Stomach	stomach
25	chr8:110572000-110589000	Weak transcription	Aorta	Aorta
26	chr8:110572800-110586600	Weak transcription	GM12878-XiMat	blood
27	chr8:110573000-110587200	Weak transcription	Fetal Muscle Trunk	muscle
28	chr8:110573200-110586800	Weak transcription	Fetal Brain Female	brain
29	chr8:110573200-110587800	Weak transcription	Colon Smooth Muscle	Colon
30	chr8:110576000-110586800	Weak transcription	Ovary	ovary
31	chr8:110576200-110586800	Weak transcription	Fetal Intestine Large	intestine
32	chr8:110576200-110587200	Weak transcription	Right Ventricle	heart
33	chr8:110576200-110590400	Weak transcription	Skeletal Muscle Male	skeletal muscle
34	chr8:110577000-110586600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr8:110577000-110586800	Weak transcription	HSMMtube	muscle
36	chr8:110577000-110587200	Weak transcription	Fetal Muscle Leg	muscle
37	chr8:110577000-110589400	Weak transcription	K562	blood
38	chr8:110577200-110587200	Weak transcription	Brain Inferior Temporal Lobe	brain
39	chr8:110577400-110586600	Weak transcription	Fetal Lung	lung
40	chr8:110577400-110586600	Weak transcription	Osteobl	bone
41	chr8:110577400-110590800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr8:110577800-110586800	Weak transcription	Rectal Mucosa Donor 29	rectum
43	chr8:110577800-110587200	Weak transcription	Placenta	Placenta
44	chr8:110579400-110587200	Weak transcription	Lung	lung
45	chr8:110579600-110590400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
46	chr8:110580000-110588800	Weak transcription	Primary T cells from cord blood	blood
47	chr8:110580000-110589400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr8:110580000-110589600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr8:110580200-110587200	Weak transcription	Left Ventricle	heart
50	chr8:110580400-110586600	Weak transcription	Rectal Mucosa Donor 31	rectum

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