Variant report

Variant	rs73321220
Chromosome Location	chr10:97169939-97169940
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:97161181..97166322-chr10:97166660..97170109,5	K562	blood:
2	chr10:97168759..97171554-chr10:97179221..97181163,2	K562	blood:

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11817920	1.00[AMR][1000 genomes]
rs58484274	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58503426	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61119394	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61545469	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73319301	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73321203	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73321218	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73321221	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73321224	1.00[AMR][1000 genomes]
rs73321228	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73321231	1.00[AMR][1000 genomes]
rs73321280	1.00[AMR][1000 genomes]

No data

Chromatin state (count:76 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97154400-97190800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr10:97155400-97170800	Enhancers	Right Atrium	heart
3	chr10:97156800-97173400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr10:97156800-97182600	Weak transcription	Esophagus	oesophagus
5	chr10:97157000-97173200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr10:97157000-97174000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr10:97157000-97183200	Weak transcription	Colonic Mucosa	Colon
8	chr10:97157000-97190400	Weak transcription	Spleen	Spleen
9	chr10:97158600-97199600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr10:97159200-97187000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr10:97162800-97171000	Strong transcription	Placenta	Placenta
12	chr10:97162800-97171200	Strong transcription	Fetal Intestine Large	intestine
13	chr10:97165400-97177200	Strong transcription	HepG2	liver
14	chr10:97166000-97170000	Enhancers	Brain Angular Gyrus	brain
15	chr10:97166200-97170200	Enhancers	Brain Anterior Caudate	brain
16	chr10:97166400-97185800	Weak transcription	Fetal Lung	lung
17	chr10:97166600-97170000	Enhancers	Fetal Heart	heart
18	chr10:97166600-97171800	Weak transcription	Pancreatic Islets	Pancreatic Islet
19	chr10:97166800-97170000	Enhancers	Duodenum Smooth Muscle	Duodenum
20	chr10:97167000-97173600	Weak transcription	Gastric	stomach
21	chr10:97167000-97173800	Weak transcription	Brain Germinal Matrix	brain
22	chr10:97167200-97173800	Weak transcription	Pancreas	Pancrea
23	chr10:97167200-97183200	Weak transcription	Duodenum Mucosa	Duodenum
24	chr10:97167400-97171000	Enhancers	Cortex derived primary cultured neurospheres	brain
25	chr10:97167600-97170400	Genic enhancers	Skeletal Muscle Male	skeletal muscle
26	chr10:97167600-97172000	Genic enhancers	Skeletal Muscle Female	skeletal muscle
27	chr10:97167800-97170000	Enhancers	Brain Cingulate Gyrus	brain
28	chr10:97167800-97171000	Enhancers	iPS-15b Cell Line	embryonic stem cell
29	chr10:97167800-97173400	Weak transcription	Fetal Muscle Trunk	muscle
30	chr10:97168000-97170400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
31	chr10:97168000-97170600	Enhancers	H9 Cell Line	embryonic stem cell
32	chr10:97168000-97173400	Weak transcription	Fetal Intestine Small	intestine
33	chr10:97168200-97170200	Weak transcription	Aorta	Aorta
34	chr10:97168200-97170800	Genic enhancers	Stomach Smooth Muscle	stomach
35	chr10:97168200-97171000	Enhancers	Brain Hippocampus Middle	brain
36	chr10:97168200-97172600	Weak transcription	Psoas Muscle	Psoas
37	chr10:97168200-97173800	Weak transcription	Rectal Mucosa Donor 29	rectum
38	chr10:97168200-97174000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
39	chr10:97168200-97174000	Weak transcription	Lung	lung
40	chr10:97168400-97170400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr10:97168400-97171000	Enhancers	H1 Cell Line	embryonic stem cell
42	chr10:97168600-97170200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr10:97168600-97175200	Weak transcription	HSMMtube	muscle
44	chr10:97168800-97170400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
45	chr10:97168800-97171400	Weak transcription	Right Ventricle	heart
46	chr10:97169000-97170400	Enhancers	Brain Substantia Nigra	brain
47	chr10:97169000-97177000	Strong transcription	Liver	Liver
48	chr10:97169200-97172000	Weak transcription	Sigmoid Colon	Sigmoid Colon
49	chr10:97169200-97172400	Weak transcription	Fetal Muscle Leg	muscle
50	chr10:97169200-97180400	Weak transcription	Ovary	ovary

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