The 2.0 version of rSNPBase

Variant report

Variant rs73321231
Chromosome Location chr10:97185381-97185382
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97154400-97190800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr10:97157000-97190400 Weak transcription Spleen Spleen
3 chr10:97158600-97199600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr10:97159200-97187000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr10:97166400-97185800 Weak transcription Fetal Lung lung
6 chr10:97169600-97204800 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr10:97170600-97197800 Weak transcription H9 Cell Line embryonic stem cell
8 chr10:97171000-97186600 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr10:97171000-97208000 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr10:97175000-97189800 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr10:97175800-97187200 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr10:97175800-97204000 Weak transcription Psoas Muscle Psoas
13 chr10:97176000-97189000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr10:97176000-97196800 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr10:97176000-97199200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr10:97176200-97190400 Weak transcription H1 Cell Line embryonic stem cell
17 chr10:97178400-97188600 Strong transcription Liver Liver
18 chr10:97178800-97186200 Strong transcription HepG2 liver
19 chr10:97178800-97198800 Genic enhancers Colon Smooth Muscle Colon
20 chr10:97179200-97187200 Strong transcription HSMMtube muscle
21 chr10:97180200-97186200 Enhancers Fetal Brain Male brain
22 chr10:97180800-97195400 Weak transcription Ovary ovary
23 chr10:97181200-97193600 Genic enhancers Breast Myoepithelial Primary Cells Breast
24 chr10:97181800-97193000 Genic enhancers Stomach Smooth Muscle stomach
25 chr10:97182000-97190800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr10:97182200-97196800 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr10:97183000-97186200 Enhancers Fetal Heart heart
28 chr10:97183200-97194200 Weak transcription HSMM muscle
29 chr10:97183400-97188400 Weak transcription Brain Germinal Matrix brain
30 chr10:97183600-97186400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr10:97183600-97187200 Weak transcription Adipose Nuclei Adipose
32 chr10:97183600-97187800 Weak transcription Colonic Mucosa Colon
33 chr10:97183600-97188400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr10:97183600-97188400 Weak transcription Brain Cingulate Gyrus brain
35 chr10:97183800-97185600 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr10:97183800-97186200 Weak transcription GM12878-XiMat blood
37 chr10:97183800-97186600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr10:97183800-97187600 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr10:97183800-97188400 Weak transcription Brain Substantia Nigra brain
40 chr10:97183800-97188600 Weak transcription Brain Angular Gyrus brain
41 chr10:97183800-97189200 Weak transcription Duodenum Mucosa Duodenum
42 chr10:97183800-97190000 Weak transcription Brain Inferior Temporal Lobe brain
43 chr10:97183800-97190400 Strong transcription Fetal Stomach stomach
44 chr10:97184000-97185400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr10:97184000-97185600 Weak transcription Stomach Mucosa stomach
46 chr10:97184000-97186200 Weak transcription Brain Anterior Caudate brain
47 chr10:97184000-97186200 Weak transcription Fetal Intestine Large intestine
48 chr10:97184000-97186200 Weak transcription Right Atrium heart
49 chr10:97184000-97186200 Weak transcription Right Ventricle heart
50 chr10:97184000-97186200 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015