Variant report
| Variant | rs73321687 |
|---|---|
| Chromosome Location | chr14:79331732-79331733 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:23)
| rs_ID | r2[population] |
|---|---|
| rs10136690 | 1.00[EUR][1000 genomes] |
| rs10140529 | 1.00[EUR][1000 genomes] |
| rs10145952 | 1.00[EUR][1000 genomes] |
| rs17094087 | 1.00[EUR][1000 genomes] |
| rs17108387 | 1.00[EUR][1000 genomes] |
| rs17108455 | 1.00[EUR][1000 genomes] |
| rs17108499 | 1.00[EUR][1000 genomes] |
| rs28619030 | 1.00[EUR][1000 genomes] |
| rs57057681 | 1.00[EUR][1000 genomes] |
| rs61291300 | 1.00[EUR][1000 genomes] |
| rs7158612 | 1.00[EUR][1000 genomes] |
| rs73317254 | 1.00[EUR][1000 genomes] |
| rs73317257 | 1.00[EUR][1000 genomes] |
| rs73317263 | 1.00[EUR][1000 genomes] |
| rs73320804 | 1.00[EUR][1000 genomes] |
| rs73320805 | 1.00[EUR][1000 genomes] |
| rs73321613 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73325334 | 1.00[EUR][1000 genomes] |
| rs73332961 | 1.00[EUR][1000 genomes] |
| rs8005448 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs8005492 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs8011912 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs8011993 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv832838 | chr14:79306627-79445382 | Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
| 2 | nsv1048274 | chr14:79323592-79417906 | Enhancers Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr14:79325800-79335200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
