Variant report

Variant	rs73326657
Chromosome Location	chr12:57256738-57256739
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs57115078	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58416798	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61633783	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73326643	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73326652	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73326663	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73326665	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73326670	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73326673	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73326683	1.00[AMR][1000 genomes]
rs73326688	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73326690	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73326692	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73326697	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9919706	0.90[AFR][1000 genomes]
rs9919771	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9919774	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040850	chr12:57055011-57679209	Strong transcription Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:57255800-57259200	ZNF genes & repeats	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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