Variant report

Variant	rs733334
Chromosome Location	chr12:117732689-117732690
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs3782204	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs505381	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs509190	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs522910	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs552268	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs567910	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7295972	1.00[CEU][hapmap];0.86[CHB][hapmap];0.93[CHD][hapmap];0.87[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7977109	0.96[CEU][hapmap];0.97[GIH][hapmap];0.98[TSI][hapmap];0.99[EUR][1000 genomes]
rs816297	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:117697200-117746200	Weak transcription	Brain Anterior Caudate	brain
2	chr12:117728000-117771200	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr12:117731800-117732800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr12:117732000-117732800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr12:117732000-117732800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
6	chr12:117732600-117747000	Weak transcription	NHEK	skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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