Variant report

Variant	rs73346388
Chromosome Location	chr14:81706516-81706517
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs3210528	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55912375	1.00[AMR][1000 genomes]
rs56029379	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56939581	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57616891	1.00[AMR][1000 genomes]
rs60127836	1.00[AMR][1000 genomes]
rs60303104	1.00[AMR][1000 genomes]
rs60359782	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61159018	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs61175070	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73342260	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73342267	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73344360	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73344387	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74067426	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832841	chr14:81588322-81743921	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	86 gene(s)	inside rSNPs	diseases
2	nsv902118	chr14:81679650-81715989	Active TSS Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	84 gene(s)	inside rSNPs	n/a
3	nsv974355	chr14:81705202-81712801	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81706400-81706600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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