The 2.0 version of rSNPBase

Variant report

Variant rs73349780
Chromosome Location chr6:4065930-4065931
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:4023400-4071600 Weak transcription Stomach Mucosa stomach
2 chr6:4023800-4067000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr6:4030800-4066600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr6:4031000-4066400 Strong transcription HUES48 Cell Line embryonic stem cell
5 chr6:4031200-4066600 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr6:4034000-4066800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr6:4035800-4066000 Strong transcription Primary monocytes fromperipheralblood blood
8 chr6:4035800-4066000 Strong transcription Rectal Mucosa Donor 29 rectum
9 chr6:4035800-4066200 Strong transcription iPS-20b Cell Line embryonic stem cell
10 chr6:4036000-4066600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr6:4036000-4066600 Strong transcription Duodenum Mucosa Duodenum
12 chr6:4037200-4066200 Strong transcription Liver Liver
13 chr6:4037600-4066200 Strong transcription Rectal Mucosa Donor 31 rectum
14 chr6:4037600-4066400 Strong transcription Primary neutrophils fromperipheralblood blood
15 chr6:4038800-4066000 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr6:4042000-4066400 Strong transcription Adipose Nuclei Adipose
17 chr6:4052000-4067000 Strong transcription Primary B cells from cord blood blood
18 chr6:4052400-4067400 Weak transcription Psoas Muscle Psoas
19 chr6:4056200-4066600 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr6:4056400-4066400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr6:4056600-4066200 Strong transcription Duodenum Smooth Muscle Duodenum
22 chr6:4056600-4066800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr6:4058200-4075000 Weak transcription Small Intestine intestine
24 chr6:4059000-4066400 Strong transcription Stomach Smooth Muscle stomach
25 chr6:4059800-4066200 Strong transcription HUES64 Cell Line embryonic stem cell
26 chr6:4059800-4066200 Strong transcription Primary T helper naive cells fromperipheralblood blood
27 chr6:4059800-4066200 Strong transcription Hela-S3 cervix
28 chr6:4060000-4066400 Strong transcription Primary T helper cells fromperipheralblood blood
29 chr6:4060000-4067000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr6:4060200-4066200 Strong transcription Primary T cells fromperipheralblood blood
31 chr6:4060200-4066200 Strong transcription HUVEC blood vessel
32 chr6:4060200-4066400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
33 chr6:4060200-4067000 Strong transcription Fetal Thymus thymus
34 chr6:4060200-4067200 Weak transcription Fetal Intestine Small intestine
35 chr6:4060400-4066000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr6:4060400-4066000 Strong transcription A549 lung
37 chr6:4060400-4066400 Weak transcription Pancreas Pancrea
38 chr6:4060400-4066600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr6:4060400-4066600 Strong transcription Primary hematopoietic stem cells short term culture blood
40 chr6:4060400-4067000 Strong transcription Primary T cells from cord blood blood
41 chr6:4060400-4068200 Weak transcription Ovary ovary
42 chr6:4060600-4066400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr6:4060600-4066400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr6:4060600-4066400 Strong transcription Muscle Satellite Cultured Cells --
45 chr6:4060600-4066600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr6:4060600-4066800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr6:4060600-4067200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr6:4060800-4066200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr6:4060800-4066400 Strong transcription HMEC breast
50 chr6:4060800-4066600 Strong transcription NH-A brain

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Last update: Aug 31, 2015