Variant report

Variant	rs73367526
Chromosome Location	chr7:70953536-70953537
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:70923018..70925671-chr7:70952208..70954590,2	K562	blood:

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs11972101	1.00[AMR][1000 genomes]
rs11981404	1.00[AMR][1000 genomes]
rs11981510	1.00[AMR][1000 genomes]
rs11981830	1.00[AMR][1000 genomes]
rs2906267	1.00[AMR][1000 genomes]
rs4286834	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4392778	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4394286	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4425646	1.00[AMR][1000 genomes]
rs4493801	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57276588	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59343577	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73362092	1.00[AMR][1000 genomes]
rs73362094	1.00[AMR][1000 genomes]
rs73362101	1.00[AMR][1000 genomes]
rs73363706	1.00[AMR][1000 genomes]
rs73363709	1.00[AMR][1000 genomes]
rs73363712	1.00[AMR][1000 genomes]
rs73363713	1.00[AMR][1000 genomes]
rs73363721	1.00[AMR][1000 genomes]
rs73363724	1.00[AMR][1000 genomes]
rs73363728	1.00[AMR][1000 genomes]
rs73363730	1.00[AMR][1000 genomes]
rs73363732	1.00[AMR][1000 genomes]
rs73363734	1.00[AMR][1000 genomes]
rs73363739	1.00[AMR][1000 genomes]
rs73363743	1.00[AMR][1000 genomes]
rs73363744	1.00[AMR][1000 genomes]
rs73363746	1.00[AMR][1000 genomes]
rs73363747	1.00[AMR][1000 genomes]
rs73363749	1.00[AMR][1000 genomes]
rs73363751	1.00[AMR][1000 genomes]
rs73363755	1.00[AMR][1000 genomes]
rs73363757	1.00[AMR][1000 genomes]
rs73363773	1.00[AMR][1000 genomes]
rs73363788	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73365673	0.85[AFR][1000 genomes]
rs73365683	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73367503	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73367504	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73367508	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73367518	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73367523	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73367533	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7456388	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9942637	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519090	chr7:70085934-71071896	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1015261	chr7:70404302-71255933	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:70944000-70962200	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr7:70944200-70962200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr7:70945000-70954200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr7:70945400-70962000	Weak transcription	Fetal Stomach	stomach
5	chr7:70946800-70972600	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr7:70947800-70972600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr7:70948000-70954000	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr7:70948200-70962200	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr7:70950800-70954000	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr7:70951400-70955000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr7:70951600-70953600	Enhancers	HSMMtube	muscle
12	chr7:70951600-70960800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr7:70952200-70953600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr7:70952200-70954000	Weak transcription	Fetal Muscle Trunk	muscle
15	chr7:70952200-70961200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr7:70953000-70956200	Weak transcription	Fetal Muscle Leg	muscle
17	chr7:70953200-70953600	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr7:70953200-70953800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr7:70953200-70954000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr7:70953400-70962000	Weak transcription	Ovary	ovary

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