Variant report

Variant	rs73374991
Chromosome Location	chr7:53626935-53626936
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs60360422	0.88[ASN][1000 genomes]
rs73374985	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948546	chr7:53538304-54337148	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv1023940	chr7:53600769-53631566	Weak transcription Enhancers Bivalent Enhancer	lncRNA	n/a	inside rSNPs	diseases
3	nsv538851	chr7:53600769-53631566	Enhancers Weak transcription Bivalent Enhancer	lncRNA	n/a	inside rSNPs	diseases
4	esv2761330	chr7:53601598-53632542	Enhancers Weak transcription Bivalent Enhancer	lncRNA	n/a	inside rSNPs	diseases
5	nsv607024	chr7:53602556-53628253	Enhancers Bivalent Enhancer Weak transcription	lncRNA	n/a	inside rSNPs	diseases
6	nsv888046	chr7:53613811-53661764	Enhancers Weak transcription	TF binding region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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