The 2.0 version of rSNPBase

Variant report

Variant rs73390104
Chromosome Location chr12:105079958-105079959
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:105067800-105096000 Weak transcription K562 blood
2 chr12:105071200-105085800 Weak transcription Brain Hippocampus Middle brain
3 chr12:105071800-105085800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr12:105072200-105089000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr12:105074000-105085800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr12:105074200-105083200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr12:105074600-105089400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr12:105075000-105083200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr12:105076000-105080200 Enhancers Fetal Stomach stomach
10 chr12:105076200-105080400 Enhancers Colon Smooth Muscle Colon
11 chr12:105076600-105080000 Weak transcription A549 lung
12 chr12:105076800-105081000 Enhancers Dnd41 blood
13 chr12:105076800-105081600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr12:105076800-105081800 Enhancers Primary T helper naive cells from peripheral blood blood
15 chr12:105076800-105083600 Enhancers Primary T cells fromperipheralblood blood
16 chr12:105076800-105085600 Enhancers Primary hematopoietic stem cells blood
17 chr12:105076800-105086800 Enhancers Primary monocytes fromperipheralblood blood
18 chr12:105077000-105080800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr12:105077000-105081200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr12:105077000-105082600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr12:105077000-105082600 Enhancers Primary T helper cells fromperipheralblood blood
22 chr12:105077000-105088600 Weak transcription Lung lung
23 chr12:105077000-105089000 Weak transcription Left Ventricle heart
24 chr12:105077400-105080200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr12:105077600-105080800 Weak transcription Fetal Thymus thymus
26 chr12:105078000-105080200 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr12:105078000-105081400 Enhancers Primary neutrophils fromperipheralblood blood
28 chr12:105078000-105084800 Weak transcription Brain Anterior Caudate brain
29 chr12:105078200-105080200 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr12:105078200-105080800 Enhancers Monocytes-CD14+_RO01746 blood
31 chr12:105078200-105081400 Genic enhancers Primary hematopoietic stem cells short term culture blood
32 chr12:105078200-105081400 Weak transcription Thymus Thymus
33 chr12:105078400-105080200 Weak transcription Primary T cells from cord blood blood
34 chr12:105078400-105080400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr12:105078400-105081200 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr12:105078400-105085000 Weak transcription Spleen Spleen
37 chr12:105078400-105085400 Weak transcription Right Atrium heart
38 chr12:105078600-105083600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
39 chr12:105078800-105080400 Enhancers Osteobl bone
40 chr12:105078800-105082400 Enhancers Primary T helper 17 cells PMA-I stimulated --
41 chr12:105078800-105082800 Enhancers Primary T killer memory cells from peripheral blood blood
42 chr12:105079000-105081200 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr12:105079000-105088000 Weak transcription Adipose Nuclei Adipose
44 chr12:105079200-105080200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr12:105079200-105080200 Weak transcription Primary B cells from cord blood blood
46 chr12:105079200-105081000 Enhancers Small Intestine intestine
47 chr12:105079200-105085800 Enhancers Primary Natural Killer cells fromperipheralblood blood
48 chr12:105079400-105080200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr12:105079400-105080200 Enhancers Aorta Aorta
50 chr12:105079400-105080200 Enhancers Fetal Muscle Leg muscle

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Last update: Aug 31, 2015