The 2.0 version of rSNPBase

Variant report

Variant rs73390309
Chromosome Location chr15:49437743-49437744
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49403400-49440200 Weak transcription Pancreas Pancrea
2 chr15:49405600-49441800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr15:49413600-49447000 Weak transcription Stomach Mucosa stomach
4 chr15:49419000-49445800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr15:49420200-49447000 Weak transcription Spleen Spleen
6 chr15:49420400-49447000 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr15:49429000-49437800 Strong transcription Hela-S3 cervix
8 chr15:49429200-49447000 Weak transcription Esophagus oesophagus
9 chr15:49431000-49438600 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr15:49433800-49446600 Weak transcription Fetal Intestine Small intestine
11 chr15:49434800-49438800 Weak transcription Psoas Muscle Psoas
12 chr15:49435200-49445800 Weak transcription Fetal Heart heart
13 chr15:49435600-49446600 Weak transcription Right Ventricle heart
14 chr15:49435800-49437800 Weak transcription NHDF-Ad bronchial
15 chr15:49435800-49438200 Weak transcription A549 lung
16 chr15:49435800-49438200 Weak transcription HSMM muscle
17 chr15:49435800-49438400 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr15:49435800-49438400 Weak transcription Brain Substantia Nigra brain
19 chr15:49435800-49438400 Weak transcription Colon Smooth Muscle Colon
20 chr15:49435800-49438600 Weak transcription Rectal Smooth Muscle rectum
21 chr15:49435800-49438600 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr15:49435800-49438600 Weak transcription Small Intestine intestine
23 chr15:49435800-49440000 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr15:49435800-49440200 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr15:49435800-49440400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr15:49435800-49440600 Weak transcription Brain Anterior Caudate brain
27 chr15:49435800-49440600 Weak transcription Brain Inferior Temporal Lobe brain
28 chr15:49435800-49440800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr15:49435800-49442800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr15:49435800-49442800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr15:49435800-49443000 Weak transcription Colonic Mucosa Colon
32 chr15:49435800-49443000 Weak transcription Placenta Amnion Placenta Amnion
33 chr15:49435800-49445400 Weak transcription Brain Germinal Matrix brain
34 chr15:49435800-49445600 Weak transcription Fetal Brain Male brain
35 chr15:49435800-49445600 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr15:49435800-49446000 Weak transcription Fetal Kidney kidney
37 chr15:49435800-49446000 Weak transcription Stomach Smooth Muscle stomach
38 chr15:49435800-49446600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr15:49435800-49446600 Weak transcription HSMMtube muscle
40 chr15:49435800-49446800 Weak transcription Aorta Aorta
41 chr15:49435800-49446800 Weak transcription Fetal Muscle Trunk muscle
42 chr15:49436000-49438400 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr15:49436000-49438400 Weak transcription Brain Hippocampus Middle brain
44 chr15:49436000-49438600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr15:49436000-49438600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr15:49436000-49438600 Weak transcription Duodenum Mucosa Duodenum
47 chr15:49436000-49438800 Weak transcription Ovary ovary
48 chr15:49436000-49439600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr15:49436000-49439600 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr15:49436000-49440000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015