The 2.0 version of rSNPBase

Variant report

Variant rs73408126
Chromosome Location chr15:49409491-49409492
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49388800-49418800 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr15:49388800-49434800 Weak transcription Small Intestine intestine
3 chr15:49393600-49413200 Weak transcription HMEC breast
4 chr15:49395400-49419000 Weak transcription Fetal Kidney kidney
5 chr15:49395600-49426400 Weak transcription Rectal Smooth Muscle rectum
6 chr15:49396000-49419600 Weak transcription NHEK skin
7 chr15:49396400-49418800 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr15:49398600-49427600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr15:49399200-49414600 Weak transcription HUVEC blood vessel
10 chr15:49403000-49417200 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr15:49403000-49434600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr15:49403200-49413000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr15:49403200-49423400 Weak transcription Psoas Muscle Psoas
14 chr15:49403400-49419600 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr15:49403400-49440200 Weak transcription Pancreas Pancrea
16 chr15:49403600-49411200 Weak transcription Fetal Intestine Small intestine
17 chr15:49403600-49423600 Weak transcription Esophagus oesophagus
18 chr15:49403600-49432200 Weak transcription Fetal Stomach stomach
19 chr15:49403600-49435200 Weak transcription Aorta Aorta
20 chr15:49403600-49435200 Weak transcription Gastric stomach
21 chr15:49403600-49435400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr15:49403800-49417400 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr15:49403800-49419400 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr15:49403800-49433200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr15:49404000-49419800 Weak transcription NHLF lung
26 chr15:49404400-49419800 Weak transcription Fetal Muscle Trunk muscle
27 chr15:49404600-49424000 Weak transcription Placenta Amnion Placenta Amnion
28 chr15:49404800-49415400 Weak transcription Hela-S3 cervix
29 chr15:49404800-49417200 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr15:49404800-49417600 Weak transcription Primary T cells fromperipheralblood blood
31 chr15:49404800-49419000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr15:49404800-49419000 Weak transcription Primary T cells from cord blood blood
33 chr15:49404800-49419000 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr15:49404800-49419200 Weak transcription Brain Angular Gyrus brain
35 chr15:49404800-49419400 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr15:49404800-49419400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr15:49404800-49419400 Weak transcription Brain Cingulate Gyrus brain
38 chr15:49404800-49419600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr15:49404800-49419600 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr15:49404800-49419600 Weak transcription Brain Hippocampus Middle brain
41 chr15:49404800-49419600 Weak transcription Brain Inferior Temporal Lobe brain
42 chr15:49404800-49419600 Weak transcription Ovary ovary
43 chr15:49404800-49419600 Weak transcription Stomach Smooth Muscle stomach
44 chr15:49404800-49419800 Weak transcription Left Ventricle heart
45 chr15:49404800-49419800 Weak transcription Thymus Thymus
46 chr15:49404800-49423400 Weak transcription HepG2 liver
47 chr15:49404800-49425600 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr15:49404800-49434600 Weak transcription Right Ventricle heart
49 chr15:49404800-49435000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr15:49405000-49414000 Weak transcription HSMM muscle

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Last update: Aug 31, 2015