Variant report

Variant	rs73405648
Chromosome Location	chr9:14013628-14013629
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10453183	1.00[EUR][1000 genomes]
rs12002489	1.00[EUR][1000 genomes]
rs1969937	1.00[EUR][1000 genomes]
rs1969939	1.00[EUR][1000 genomes]
rs73405655	1.00[EUR][1000 genomes]
rs73405657	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73405658	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73405663	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73405668	0.93[AFR][1000 genomes]
rs73416910	1.00[EUR][1000 genomes]
rs73419185	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033764	chr9:13764918-14226168	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv892593	chr9:13948798-14233159	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:13994000-14027000	Weak transcription	Aorta	Aorta
2	chr9:14011800-14014800	Enhancers	Fetal Heart	heart
3	chr9:14011800-14015400	Enhancers	Skeletal Muscle Female	skeletal muscle
4	chr9:14012000-14014000	Enhancers	Left Ventricle	heart
5	chr9:14012000-14014800	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr9:14012200-14014000	Enhancers	Psoas Muscle	Psoas
7	chr9:14013200-14014000	Enhancers	Right Atrium	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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