Variant report

Variant	rs73419185
Chromosome Location	chr9:13911660-13911661
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10453183	1.00[EUR][1000 genomes]
rs12002489	1.00[EUR][1000 genomes]
rs12005535	1.00[EUR][1000 genomes]
rs16930920	1.00[EUR][1000 genomes]
rs1969937	1.00[EUR][1000 genomes]
rs1969939	1.00[EUR][1000 genomes]
rs55716496	1.00[EUR][1000 genomes]
rs56145825	1.00[EUR][1000 genomes]
rs56166354	1.00[EUR][1000 genomes]
rs57153569	1.00[EUR][1000 genomes]
rs57459257	1.00[AMR][1000 genomes]
rs59355338	1.00[EUR][1000 genomes]
rs59592609	1.00[EUR][1000 genomes]
rs7025657	1.00[EUR][1000 genomes]
rs7039195	1.00[AMR][1000 genomes]
rs73403921	1.00[AMR][1000 genomes]
rs73405648	1.00[EUR][1000 genomes]
rs73405655	1.00[EUR][1000 genomes]
rs73405657	1.00[EUR][1000 genomes]
rs73405658	1.00[EUR][1000 genomes]
rs73405663	1.00[EUR][1000 genomes]
rs73416910	1.00[EUR][1000 genomes]
rs73419148	1.00[AMR][1000 genomes]
rs73419176	1.00[AMR][1000 genomes]
rs73419187	1.00[AMR][1000 genomes]
rs73648007	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022001	chr9:13717736-13983738	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1033764	chr9:13764918-14226168	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	nsv1032113	chr9:13861066-13923136	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv1032447	chr9:13861066-13923673	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv613635	chr9:13893246-13961462	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:13902000-13914200	Weak transcription	Psoas Muscle	Psoas
2	chr9:13911200-13911800	Weak transcription	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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