Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10094445	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10096604	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10097810	0.84[ASN][1000 genomes]
rs10098559	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10956495	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1600931	0.81[ASN][1000 genomes]
rs1905168	0.81[ASN][1000 genomes]
rs1967018	0.83[ASN][1000 genomes]
rs1979475	0.84[ASN][1000 genomes]
rs1979476	0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1988911	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2128386	0.82[ASN][1000 genomes]
rs2894495	0.84[ASN][1000 genomes]
rs3912318	0.84[ASN][1000 genomes]
rs3957254	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4103049	0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4260864	0.84[ASN][1000 genomes]
rs4412339	0.86[ASN][1000 genomes]
rs4500051	0.84[ASN][1000 genomes]
rs4733741	0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6470781	0.85[ASN][1000 genomes]
rs6470782	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6470783	0.86[ASN][1000 genomes]
rs6983184	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7821985	0.81[ASN][1000 genomes]
rs7823788	0.86[ASN][1000 genomes]
rs7834217	0.84[ASN][1000 genomes]
rs7834660	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9656980	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428524	chr8:130731660-130894467	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv522535	chr8:130804293-130844400	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv526686	chr8:130808973-130839132	Flanking Active TSS Active TSS Enhancers Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130811600-130815200	Weak transcription	Monocytes-CD14+_RO01746	blood
2	chr8:130812000-130812400	Enhancers	NHEK	skin
3	chr8:130812000-130812800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr8:130812000-130812800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr8:130812200-130813600	Enhancers	Esophagus	oesophagus
6	chr8:130812200-130813800	Enhancers	HMEC	breast
7	chr8:130812200-130814400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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