Variant report

Variant rs73406890
Chromosome Location chr6:1605258-1605259
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:1604000-1605800 Bivalent Enhancer Fetal Brain Male brain
2 chr6:1604200-1605800 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
3 chr6:1604200-1606000 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr6:1604200-1610800 Active TSS Aorta Aorta
5 chr6:1604400-1605400 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr6:1604400-1605400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
7 chr6:1604400-1605400 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
8 chr6:1604400-1605400 Bivalent/Poised TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr6:1604400-1605400 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
10 chr6:1604400-1605400 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
11 chr6:1604400-1605400 Bivalent/Poised TSS HSMM muscle
12 chr6:1604400-1605400 Flanking Bivalent TSS/Enh NHEK skin
13 chr6:1604400-1605600 Flanking Bivalent TSS/Enh H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr6:1604400-1605600 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
15 chr6:1604400-1605600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
16 chr6:1604400-1605600 Bivalent/Poised TSS Brain Cingulate Gyrus brain
17 chr6:1604400-1605600 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
18 chr6:1604400-1605800 Flanking Bivalent TSS/Enh iPS DF 19.11 Cell Line embryonic stem cell
19 chr6:1604400-1605800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells short term culture blood
20 chr6:1604400-1605800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr6:1604400-1605800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
22 chr6:1604400-1605800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
23 chr6:1604400-1606000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
24 chr6:1604400-1606000 Bivalent Enhancer Primary monocytes fromperipheralblood blood
25 chr6:1604400-1606000 Bivalent/Poised TSS Brain Angular Gyrus brain
26 chr6:1604400-1606000 Bivalent Enhancer Placenta Placenta
27 chr6:1604400-1606000 Bivalent Enhancer Sigmoid Colon Sigmoid Colon
28 chr6:1604400-1606200 Bivalent Enhancer Fetal Stomach stomach
29 chr6:1604400-1606400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
30 chr6:1604400-1610800 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
31 chr6:1604600-1605600 Bivalent/Poised TSS Brain Anterior Caudate brain
32 chr6:1604600-1605800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
33 chr6:1604600-1605800 Flanking Active TSS Primary hematopoietic stem cells blood
34 chr6:1604600-1605800 Enhancers Spleen Spleen
35 chr6:1604800-1605400 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr6:1604800-1605400 Flanking Active TSS Primary B cells from cord blood blood
37 chr6:1604800-1605400 Flanking Bivalent TSS/Enh Primary T helper cells PMA-I stimulated --
38 chr6:1604800-1605400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
39 chr6:1604800-1605400 Flanking Bivalent TSS/Enh Primary T helper cells fromperipheralblood blood
40 chr6:1604800-1605400 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
41 chr6:1604800-1605400 Flanking Bivalent TSS/Enh Duodenum Smooth Muscle Duodenum
42 chr6:1604800-1605400 Bivalent/Poised TSS Pancreatic Islets Pancreatic Islet
43 chr6:1604800-1605400 Flanking Bivalent TSS/Enh Placenta Amnion Placenta Amnion
44 chr6:1604800-1605400 Flanking Bivalent TSS/Enh Rectal Mucosa Donor 31 rectum
45 chr6:1604800-1605400 Flanking Active TSS HUVEC blood vessel
46 chr6:1604800-1605400 Flanking Bivalent TSS/Enh NH-A brain
47 chr6:1604800-1605600 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
48 chr6:1604800-1605600 Flanking Bivalent TSS/Enh H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr6:1604800-1605600 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr6:1604800-1605600 Flanking Bivalent TSS/Enh Primary mononuclear cells fromperipheralblood Blood

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