Variant report

Variant	rs73431795
Chromosome Location	chr7:119705324-119705325
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs59664899	1.00[AMR][1000 genomes]
rs61679179	1.00[AMR][1000 genomes]
rs73427951	1.00[AFR][1000 genomes]
rs73431771	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73431784	1.00[AMR][1000 genomes]
rs73472906	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73474738	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73474744	1.00[AMR][1000 genomes]
rs73485261	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73485277	1.00[AFR][1000 genomes]
rs73489144	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470388	chr7:119464310-119790102	Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	esv2753623	chr7:119532049-119770049	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv831112	chr7:119585169-119776619	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv831113	chr7:119683515-119886277	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:119703600-119706400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr7:119704200-119705400	Enhancers	Muscle Satellite Cultured Cells	--
3	chr7:119704200-119705400	Enhancers	HSMM	muscle
4	chr7:119704400-119705400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr7:119704400-119705400	Enhancers	HSMMtube	muscle
6	chr7:119704600-119705400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr7:119705000-119706000	Enhancers	NHLF	lung
8	chr7:119705200-119705600	Enhancers	GM12878-XiMat	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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