Variant report

Variant	rs61679179
Chromosome Location	chr7:119849574-119849575
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs57062655	1.00[AMR][1000 genomes]
rs57411631	1.00[AMR][1000 genomes]
rs57417999	1.00[AMR][1000 genomes]
rs58086739	1.00[AMR][1000 genomes]
rs58100103	1.00[AMR][1000 genomes]
rs59574653	1.00[AMR][1000 genomes]
rs60963172	1.00[AMR][1000 genomes]
rs61104791	1.00[AMR][1000 genomes]
rs73429960	1.00[AMR][1000 genomes]
rs73431771	1.00[AMR][1000 genomes]
rs73431784	1.00[AMR][1000 genomes]
rs73431795	1.00[AMR][1000 genomes]
rs73431913	1.00[AMR][1000 genomes]
rs73431916	1.00[AMR][1000 genomes]
rs73431930	1.00[AMR][1000 genomes]
rs73431937	1.00[AMR][1000 genomes]
rs73431947	1.00[AMR][1000 genomes]
rs73431954	1.00[AMR][1000 genomes]
rs73431966	1.00[AMR][1000 genomes]
rs73431968	1.00[AMR][1000 genomes]
rs73431971	1.00[AMR][1000 genomes]
rs73431979	1.00[AMR][1000 genomes]
rs73431984	1.00[AMR][1000 genomes]
rs73433807	1.00[AMR][1000 genomes]
rs73433823	1.00[AMR][1000 genomes]
rs73433825	1.00[AMR][1000 genomes]
rs73433829	1.00[AMR][1000 genomes]
rs73433838	1.00[AMR][1000 genomes]
rs73433844	1.00[AMR][1000 genomes]
rs73433850	1.00[AMR][1000 genomes]
rs73433858	1.00[AMR][1000 genomes]
rs73433862	1.00[AMR][1000 genomes]
rs73433873	1.00[AMR][1000 genomes]
rs73433887	1.00[AMR][1000 genomes]
rs73433890	1.00[AMR][1000 genomes]
rs73433898	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831113	chr7:119683515-119886277	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv608326	chr7:119828331-119995890	Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:119849400-119850200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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