Variant report
| Variant | rs73431803 |
|---|---|
| Chromosome Location | chr9:26811641-26811642 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:33)
| rs_ID | r2[population] |
|---|---|
| rs10967641 | 1.00[AMR][1000 genomes] |
| rs10967647 | 1.00[AMR][1000 genomes] |
| rs1161515 | 1.00[AMR][1000 genomes] |
| rs12352625 | 1.00[AMR][1000 genomes] |
| rs56953734 | 1.00[AMR][1000 genomes] |
| rs58092948 | 1.00[AMR][1000 genomes] |
| rs58680265 | 1.00[AMR][1000 genomes] |
| rs59315745 | 1.00[AMR][1000 genomes] |
| rs60289603 | 1.00[AMR][1000 genomes] |
| rs61242705 | 1.00[AMR][1000 genomes] |
| rs73429839 | 1.00[AMR][1000 genomes] |
| rs73429844 | 1.00[AMR][1000 genomes] |
| rs73429855 | 1.00[AMR][1000 genomes] |
| rs73429860 | 1.00[AMR][1000 genomes] |
| rs73431849 | 1.00[AMR][1000 genomes] |
| rs73431861 | 1.00[AMR][1000 genomes] |
| rs73431877 | 1.00[AMR][1000 genomes] |
| rs73431887 | 1.00[AMR][1000 genomes] |
| rs73431889 | 1.00[AMR][1000 genomes] |
| rs73433945 | 1.00[AMR][1000 genomes] |
| rs73433990 | 1.00[AMR][1000 genomes] |
| rs73433991 | 1.00[AMR][1000 genomes] |
| rs73433995 | 1.00[AMR][1000 genomes] |
| rs73433999 | 1.00[AMR][1000 genomes] |
| rs73434000 | 1.00[AMR][1000 genomes] |
| rs73436004 | 1.00[AMR][1000 genomes] |
| rs73436005 | 1.00[AMR][1000 genomes] |
| rs73436006 | 1.00[AMR][1000 genomes] |
| rs73436010 | 1.00[AMR][1000 genomes] |
| rs73436023 | 1.00[AMR][1000 genomes] |
| rs73436032 | 1.00[AMR][1000 genomes] |
| rs73436034 | 1.00[AMR][1000 genomes] |
| rs7856088 | 1.00[AMR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv1026827 | chr9:26693515-26904699 | Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 14 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr9:26811200-26812000 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
