Variant report

Variant	rs73432315
Chromosome Location	chr6:54697828-54697829
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11964104	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11964138	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11964644	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11964669	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12660174	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12661878	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12662799	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12663440	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12664770	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4360136	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57591249	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62412629	0.82[ASN][1000 genomes]
rs6901739	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6901740	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73430702	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73432306	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73432317	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7773434	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv885900	chr6:54517968-54852462	Active TSS Bivalent Enhancer Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	esv2763553	chr6:54687979-54820487	Weak transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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