Variant report

Variant	rs73434463
Chromosome Location	chr15:74842203-74842204
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr15:74835177..74840998-chr15:74841566..74844825,6	K562	blood:
2	chr15:74837964..74840998-chr15:74841652..74845839,5	K562	blood:
3	chr15:74840503..74842245-chr15:74910348..74913581,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000179335	Chromatin interaction
ENSG00000179361	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs34983171	1.00[AMR][1000 genomes]
rs73434462	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73434465	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1809847	chr15:74734500-74948063	Genic enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:119 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:74834600-74842800	Weak transcription	Esophagus	oesophagus
2	chr15:74836200-74848000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
3	chr15:74836400-74846400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr15:74836600-74845800	Strong transcription	iPS-18 Cell Line	embryonic stem cell
5	chr15:74837400-74842600	Enhancers	Fetal Lung	lung
6	chr15:74837400-74843200	Enhancers	Liver	Liver
7	chr15:74838600-74847600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr15:74839000-74845800	Strong transcription	H1 Cell Line	embryonic stem cell
9	chr15:74839000-74846200	Strong transcription	HUES48 Cell Line	embryonic stem cell
10	chr15:74839000-74846600	Weak transcription	Ovary	ovary
11	chr15:74839000-74855600	Weak transcription	Aorta	Aorta
12	chr15:74839000-74863400	Weak transcription	Gastric	stomach
13	chr15:74839000-74863600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr15:74839200-74842600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
15	chr15:74839200-74843200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr15:74839200-74843600	Weak transcription	HSMMtube	muscle
17	chr15:74839200-74844800	Weak transcription	A549	lung
18	chr15:74839200-74845000	Strong transcription	Fetal Intestine Small	intestine
19	chr15:74839200-74845600	Weak transcription	Muscle Satellite Cultured Cells	--
20	chr15:74839200-74846600	Weak transcription	Rectal Smooth Muscle	rectum
21	chr15:74839200-74847400	Weak transcription	Osteobl	bone
22	chr15:74839200-74847800	Weak transcription	Psoas Muscle	Psoas
23	chr15:74839200-74850000	Strong transcription	HUES64 Cell Line	embryonic stem cell
24	chr15:74839200-74856400	Weak transcription	Fetal Kidney	kidney
25	chr15:74839200-74859200	Weak transcription	HepG2	liver
26	chr15:74839200-74860800	Weak transcription	Colonic Mucosa	Colon
27	chr15:74839200-74862000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr15:74839200-74865200	Weak transcription	Placenta Amnion	Placenta Amnion
29	chr15:74839200-74866400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
30	chr15:74839200-74866800	Weak transcription	Pancreas	Pancrea
31	chr15:74839400-74843000	Genic enhancers	Primary T cells fromperipheralblood	blood
32	chr15:74839400-74865800	Weak transcription	HUVEC	blood vessel
33	chr15:74839400-74880600	Weak transcription	Hela-S3	cervix
34	chr15:74839600-74862400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr15:74839800-74845200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
36	chr15:74840000-74842400	Genic enhancers	Primary T helper cells fromperipheralblood	blood
37	chr15:74840000-74844000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr15:74840000-74845600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr15:74840000-74845800	Strong transcription	Primary B cells from cord blood	blood
40	chr15:74840000-74846000	Strong transcription	Primary B cells from peripheral blood	blood
41	chr15:74840000-74862000	Weak transcription	Colon Smooth Muscle	Colon
42	chr15:74840200-74843400	Strong transcription	NHEK	skin
43	chr15:74840200-74844000	Strong transcription	HMEC	breast
44	chr15:74840200-74844400	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
45	chr15:74840200-74845600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr15:74840400-74844800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr15:74840400-74845600	Strong transcription	H9 Cell Line	embryonic stem cell
48	chr15:74840400-74845600	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
49	chr15:74840400-74845800	Strong transcription	Primary T cells from cord blood	blood
50	chr15:74840600-74843000	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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