Variant report

Variant	rs73435001
Chromosome Location	chr11:24700410-24700411
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs73437104	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1055026	chr11:24151133-24737122	Enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1037744	chr11:24174588-24737122	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv897093	chr11:24675207-24736493	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1052730	chr11:24695821-25272497	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	nsv1053055	chr11:24700012-25293551	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:24699600-24700600	Enhancers	H1 Cell Line	embryonic stem cell
2	chr11:24699600-24702400	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr11:24699800-24700600	Enhancers	Fetal Heart	heart
4	chr11:24699800-24702200	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr11:24700000-24700600	Enhancers	Breast Myoepithelial Primary Cells	Breast
6	chr11:24700000-24701200	Enhancers	iPS-20b Cell Line	embryonic stem cell
7	chr11:24700000-24702200	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr11:24700000-24702200	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr11:24700000-24702400	Enhancers	iPS-15b Cell Line	embryonic stem cell
10	chr11:24700200-24700600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr11:24700200-24700800	Enhancers	Hela-S3	cervix
12	chr11:24700200-24702200	Enhancers	HUES6 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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