Variant report

Variant	rs73443153
Chromosome Location	chr11:36351375-36351376
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs1160015	0.81[AFR][1000 genomes]
rs2114136	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467791	chr11:36108497-36999385	Flanking Active TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	nsv554003	chr11:36108497-36999385	ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:36341400-36355800	Weak transcription	Brain Substantia Nigra	brain
2	chr11:36348400-36352600	Enhancers	Fetal Intestine Small	intestine
3	chr11:36349200-36354800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr11:36349600-36352000	Enhancers	Hela-S3	cervix
5	chr11:36350200-36352600	Enhancers	Fetal Intestine Large	intestine
6	chr11:36350600-36351400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr11:36350600-36351400	Enhancers	NH-A	brain
8	chr11:36350800-36351400	Enhancers	HSMMtube	muscle
9	chr11:36350800-36351400	Enhancers	HUVEC	blood vessel
10	chr11:36351000-36354800	Weak transcription	NHEK	skin
11	chr11:36351000-36355200	Weak transcription	HMEC	breast
12	chr11:36351200-36352800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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