The 2.0 version of rSNPBase

Variant report

Variant rs73448149
Chromosome Location chr6:45427846-45427847
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:45407200-45462000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr6:45414000-45431400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr6:45416400-45430600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr6:45416400-45440400 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr6:45416600-45430000 Weak transcription Small Intestine intestine
6 chr6:45419200-45456200 Weak transcription Primary T cells fromperipheralblood blood
7 chr6:45419400-45429000 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr6:45421200-45428800 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr6:45422000-45428800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr6:45422000-45429000 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr6:45422000-45429000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr6:45422000-45441200 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr6:45422000-45445000 Weak transcription Duodenum Mucosa Duodenum
14 chr6:45422200-45440000 Weak transcription Brain Angular Gyrus brain
15 chr6:45422400-45428800 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr6:45422400-45429000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr6:45422400-45438200 Weak transcription Primary monocytes fromperipheralblood blood
18 chr6:45422600-45428000 Weak transcription HSMMtube muscle
19 chr6:45422600-45429200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr6:45422600-45432400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr6:45422600-45437200 Weak transcription NHDF-Ad bronchial
22 chr6:45422600-45439800 Weak transcription NHLF lung
23 chr6:45422800-45428800 Strong transcription HSMM muscle
24 chr6:45423000-45428200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr6:45423000-45454400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr6:45423400-45428800 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr6:45423400-45434600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr6:45423600-45429200 Strong transcription Primary hematopoietic stem cells short term culture blood
29 chr6:45423800-45429200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr6:45424200-45429000 Strong transcription Muscle Satellite Cultured Cells --
31 chr6:45424600-45429200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr6:45425000-45428800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr6:45425000-45428800 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr6:45425200-45429000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr6:45425200-45429200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr6:45425200-45429200 Weak transcription HMEC breast
37 chr6:45425400-45429200 Weak transcription NHEK skin
38 chr6:45425600-45428600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr6:45425600-45428800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr6:45425600-45429000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr6:45425600-45444000 Weak transcription Fetal Thymus thymus
42 chr6:45426400-45429000 Strong transcription NH-A brain
43 chr6:45426600-45429000 Strong transcription Osteobl bone
44 chr6:45426600-45430800 Strong transcription Dnd41 blood
45 chr6:45426800-45444200 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr6:45427200-45428400 Strong transcription Primary hematopoietic stem cells blood
47 chr6:45427600-45428600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
48 chr6:45427600-45430000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr6:45427800-45428200 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr6:45427800-45429000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015