Variant report

Variant	rs734619
Chromosome Location	chr8:67286654-67286655
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs16932854	1.00[AMR][1000 genomes]
rs16932871	1.00[AMR][1000 genomes]
rs17383243	1.00[AMR][1000 genomes]
rs1961321	1.00[AMR][1000 genomes]
rs56747323	1.00[AMR][1000 genomes]
rs57240176	1.00[AMR][1000 genomes]
rs60232161	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73691533	1.00[AMR][1000 genomes]
rs73691538	1.00[AMR][1000 genomes]
rs73691539	1.00[AMR][1000 genomes]
rs9693831	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67277000-67288800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr8:67281200-67290200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr8:67281400-67290400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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