The 2.0 version of rSNPBase

Variant report

Variant rs73467947
Chromosome Location chr11:46535961-46535962
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46497600-46537600 Weak transcription A549 lung
2 chr11:46503400-46563000 Weak transcription Placenta Amnion Placenta Amnion
3 chr11:46509600-46537200 Strong transcription Primary T cells from cord blood blood
4 chr11:46515800-46537600 Weak transcription NHDF-Ad bronchial
5 chr11:46517200-46550000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr11:46527600-46537400 Weak transcription NH-A brain
7 chr11:46528000-46537400 Weak transcription Osteobl bone
8 chr11:46529600-46537400 Weak transcription Muscle Satellite Cultured Cells --
9 chr11:46529800-46542400 Weak transcription NHLF lung
10 chr11:46529800-46542600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr11:46530000-46537600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr11:46530000-46540600 Weak transcription Gastric stomach
13 chr11:46530000-46542200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr11:46530000-46542600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr11:46530200-46537400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr11:46530200-46537400 Weak transcription HSMM muscle
17 chr11:46530200-46542400 Weak transcription Hela-S3 cervix
18 chr11:46530200-46544200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr11:46530200-46550200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr11:46530200-46550600 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr11:46530400-46537400 Weak transcription HSMMtube muscle
22 chr11:46530400-46537600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr11:46530400-46541000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr11:46530400-46541000 Weak transcription Aorta Aorta
25 chr11:46530400-46542600 Weak transcription Fetal Muscle Leg muscle
26 chr11:46530400-46542600 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr11:46530400-46544600 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr11:46530400-46550400 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr11:46530400-46550600 Weak transcription Spleen Spleen
30 chr11:46530400-46556000 Weak transcription Fetal Muscle Trunk muscle
31 chr11:46530400-46559000 Weak transcription Fetal Thymus thymus
32 chr11:46530400-46561800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr11:46530600-46537400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr11:46530600-46550800 Weak transcription Colonic Mucosa Colon
35 chr11:46530800-46536600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr11:46530800-46538200 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr11:46530800-46538200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr11:46532000-46536200 Enhancers Liver Liver
39 chr11:46532200-46537200 Strong transcription Dnd41 blood
40 chr11:46532800-46536000 Genic enhancers HepG2 liver
41 chr11:46533000-46536000 Enhancers H1 Cell Line embryonic stem cell
42 chr11:46533200-46542600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr11:46533800-46536000 Enhancers ES-I3 Cell Line embryonic stem cell
44 chr11:46533800-46536200 Enhancers HUES6 Cell Line embryonic stem cell
45 chr11:46534000-46536800 Strong transcription Primary B cells from cord blood blood
46 chr11:46534000-46537400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr11:46534000-46542600 Weak transcription Fetal Intestine Small intestine
48 chr11:46534200-46536600 Enhancers Fetal Heart heart
49 chr11:46534400-46536800 Enhancers Brain Inferior Temporal Lobe brain
50 chr11:46534400-46538000 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015