Variant report
| Variant | rs1489190 |
|---|---|
| Chromosome Location | chr11:46531450-46531451 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:46497600-46537600 | Weak transcription | A549 | lung |
| 2 | chr11:46503400-46563000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 3 | chr11:46509600-46537200 | Strong transcription | Primary T cells from cord blood | blood |
| 4 | chr11:46514200-46535000 | Weak transcription | Small Intestine | intestine |
| 5 | chr11:46515000-46535000 | Weak transcription | HUVEC | blood vessel |
| 6 | chr11:46515800-46537600 | Weak transcription | NHDF-Ad | bronchial |
| 7 | chr11:46517200-46550000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 8 | chr11:46519400-46531600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 9 | chr11:46521800-46534000 | Weak transcription | Right Atrium | heart |
| 10 | chr11:46522400-46531800 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 11 | chr11:46522600-46534600 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 12 | chr11:46524600-46534400 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 13 | chr11:46527000-46535000 | Weak transcription | HMEC | breast |
| 14 | chr11:46527600-46534000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 15 | chr11:46527600-46537400 | Weak transcription | NH-A | brain |
| 16 | chr11:46527800-46535200 | Weak transcription | Pancreas | Pancrea |
| 17 | chr11:46527800-46535400 | Weak transcription | Psoas Muscle | Psoas |
| 18 | chr11:46528000-46533800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 19 | chr11:46528000-46534000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 20 | chr11:46528000-46537400 | Weak transcription | Osteobl | bone |
| 21 | chr11:46528200-46532400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 22 | chr11:46528200-46533800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 23 | chr11:46528200-46533800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 24 | chr11:46528200-46534000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 25 | chr11:46528200-46535000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 26 | chr11:46528800-46534400 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 27 | chr11:46529200-46534600 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 28 | chr11:46529600-46537400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 29 | chr11:46529800-46535000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 30 | chr11:46529800-46542400 | Weak transcription | NHLF | lung |
| 31 | chr11:46529800-46542600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 32 | chr11:46530000-46532200 | Weak transcription | Fetal Intestine Large | intestine |
| 33 | chr11:46530000-46532200 | Weak transcription | Fetal Intestine Small | intestine |
| 34 | chr11:46530000-46532600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 35 | chr11:46530000-46533800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 36 | chr11:46530000-46534400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 37 | chr11:46530000-46534600 | Weak transcription | Fetal Brain Female | brain |
| 38 | chr11:46530000-46535000 | Weak transcription | Brain Substantia Nigra | brain |
| 39 | chr11:46530000-46535200 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 40 | chr11:46530000-46535200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 41 | chr11:46530000-46535200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 42 | chr11:46530000-46535600 | Weak transcription | Brain Angular Gyrus | brain |
| 43 | chr11:46530000-46535600 | Weak transcription | Brain Anterior Caudate | brain |
| 44 | chr11:46530000-46535600 | Weak transcription | Esophagus | oesophagus |
| 45 | chr11:46530000-46535600 | Weak transcription | Right Ventricle | heart |
| 46 | chr11:46530000-46537600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 47 | chr11:46530000-46540600 | Weak transcription | Gastric | stomach |
| 48 | chr11:46530000-46542200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 49 | chr11:46530000-46542600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 50 | chr11:46530200-46533000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
