Variant report

Variant	rs73470860
Chromosome Location	chr7:116871199-116871200
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:116864347..116866979-chr7:116868628..116871312,2	K562	blood:
2	chr7:116868712..116871386-chr7:116885691..116888602,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10235166	1.00[EUR][1000 genomes]
rs35108152	1.00[EUR][1000 genomes]
rs6973376	1.00[EUR][1000 genomes]
rs73714370	1.00[EUR][1000 genomes]
rs73714372	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831108	chr7:116749534-116952011	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:58 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:116808400-116871800	Weak transcription	Rectal Smooth Muscle	rectum
2	chr7:116835000-116871400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr7:116840000-116871800	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr7:116844000-116872600	Weak transcription	Right Ventricle	heart
5	chr7:116849400-116872000	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr7:116859800-116871600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr7:116859800-116872200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr7:116859800-116873000	Weak transcription	Brain Substantia Nigra	brain
9	chr7:116859800-116878000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr7:116860400-116872800	Weak transcription	Brain Angular Gyrus	brain
11	chr7:116861000-116872000	Weak transcription	Brain Inferior Temporal Lobe	brain
12	chr7:116863600-116871800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr7:116863600-116872200	Weak transcription	Skeletal Muscle Male	skeletal muscle
14	chr7:116863800-116871200	Weak transcription	Adipose Nuclei	Adipose
15	chr7:116863800-116871400	Weak transcription	Duodenum Mucosa	Duodenum
16	chr7:116863800-116872000	Weak transcription	Primary hematopoietic stem cells	blood
17	chr7:116863800-116872000	Weak transcription	Brain Hippocampus Middle	brain
18	chr7:116863800-116872200	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr7:116864000-116873000	Weak transcription	Fetal Brain Male	brain
20	chr7:116866600-116871800	Weak transcription	Fetal Intestine Large	intestine
21	chr7:116868000-116872000	Weak transcription	Fetal Lung	lung
22	chr7:116868200-116871200	Enhancers	Fetal Muscle Leg	muscle
23	chr7:116868800-116871600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr7:116868800-116871600	Enhancers	NHLF	lung
25	chr7:116869200-116871200	Strong transcription	Fetal Brain Female	brain
26	chr7:116869200-116871200	Enhancers	Placenta Amnion	Placenta Amnion
27	chr7:116869200-116871400	Enhancers	Muscle Satellite Cultured Cells	--
28	chr7:116869200-116871400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr7:116869400-116871400	Enhancers	NH-A	brain
30	chr7:116869400-116871400	Enhancers	Osteobl	bone
31	chr7:116869400-116871600	Enhancers	NHDF-Ad	bronchial
32	chr7:116869400-116871800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr7:116869600-116871400	Enhancers	Ovary	ovary
34	chr7:116869600-116874400	Weak transcription	Brain Germinal Matrix	brain
35	chr7:116869800-116871600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr7:116870000-116871200	Weak transcription	Fetal Muscle Trunk	muscle
37	chr7:116870000-116872000	Weak transcription	Stomach Smooth Muscle	stomach
38	chr7:116870000-116872400	Weak transcription	Fetal Intestine Small	intestine
39	chr7:116870000-116878600	Weak transcription	Pancreas	Pancrea
40	chr7:116870200-116871200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr7:116870200-116871400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr7:116870200-116871600	Weak transcription	Brain Anterior Caudate	brain
43	chr7:116870200-116872600	Weak transcription	Aorta	Aorta
44	chr7:116870400-116871200	Weak transcription	Fetal Stomach	stomach
45	chr7:116870400-116872000	Weak transcription	Cortex derived primary cultured neurospheres	brain
46	chr7:116870400-116872600	Weak transcription	Placenta	Placenta
47	chr7:116870400-116873600	Weak transcription	HSMMtube	muscle
48	chr7:116870600-116871600	Enhancers	GM12878-XiMat	blood
49	chr7:116870600-116872000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr7:116870600-116872200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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