Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:49294012..49296388-chr13:49304774..49306280,2	K562	blood:
2	chr13:49294202..49296388-chr13:49304146..49306274,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs12184704	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12184705	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17072105	1.00[ASN][1000 genomes]
rs1998511	1.00[ASN][1000 genomes]
rs28445170	0.92[EUR][1000 genomes]
rs56959802	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs57042574	0.96[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs57186324	1.00[ASN][1000 genomes]
rs60424010	0.96[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs61027580	0.98[ASN][1000 genomes]
rs6561478	0.95[ASN][1000 genomes]
rs7327830	0.92[EUR][1000 genomes]
rs73478365	0.83[ASN][1000 genomes]
rs9591202	1.00[ASN][1000 genomes]
rs9591203	1.00[ASN][1000 genomes]
rs9591204	1.00[ASN][1000 genomes]
rs9591206	0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9591207	0.92[EUR][1000 genomes]
rs9591209	0.92[EUR][1000 genomes]
rs9595977	1.00[ASN][1000 genomes]
rs9595978	1.00[ASN][1000 genomes]
rs9595985	0.92[EUR][1000 genomes]
rs9595986	0.92[EUR][1000 genomes]
rs9595987	0.92[EUR][1000 genomes]
rs9595990	0.94[EUR][1000 genomes]
rs985466	1.00[ASN][1000 genomes]
rs9888525	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049117	chr13:49089476-49928945	Enhancers Strong transcription Weak transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
2	nsv832605	chr13:49171305-49344970	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
3	esv2758327	chr13:49283983-49472517	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	esv2759936	chr13:49283983-49472517	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:49259000-49302200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr13:49290000-49294400	Weak transcription	Hela-S3	cervix

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