The 2.0 version of rSNPBase

Variant report

Variant rs73479792
Chromosome Location chr9:85896563-85896564
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:85856200-85910600 Weak transcription Monocytes-CD14+_RO01746 blood
2 chr9:85866200-85913000 Weak transcription Aorta Aorta
3 chr9:85884200-85912400 Weak transcription HepG2 liver
4 chr9:85885200-85896600 Weak transcription Brain Angular Gyrus brain
5 chr9:85890400-85902400 Weak transcription Left Ventricle heart
6 chr9:85892600-85899600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr9:85895000-85897200 Enhancers Skeletal Muscle Female skeletal muscle
8 chr9:85895000-85897800 Enhancers HSMMtube muscle
9 chr9:85895000-85897800 Enhancers NHDF-Ad bronchial
10 chr9:85895000-85912800 Weak transcription Fetal Brain Female brain
11 chr9:85895200-85896800 Enhancers Esophagus oesophagus
12 chr9:85895200-85896800 Enhancers Pancreas Pancrea
13 chr9:85895200-85897000 Enhancers Primary hematopoietic stem cells short term culture blood
14 chr9:85895200-85897000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr9:85895200-85897000 Enhancers Right Atrium heart
16 chr9:85895200-85897000 Enhancers Skeletal Muscle Male skeletal muscle
17 chr9:85895200-85897200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr9:85895200-85897200 Enhancers Muscle Satellite Cultured Cells --
19 chr9:85895200-85897200 Enhancers HMEC breast
20 chr9:85895200-85897400 Enhancers Fetal Muscle Leg muscle
21 chr9:85895200-85897600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr9:85895400-85896800 Enhancers Stomach Smooth Muscle stomach
23 chr9:85895600-85896800 Enhancers Primary hematopoietic stem cells blood
24 chr9:85895600-85896800 Flanking Active TSS HUVEC blood vessel
25 chr9:85895600-85897800 Enhancers Fetal Adrenal Gland Adrenal Gland
26 chr9:85895800-85896600 Enhancers Primary monocytes fromperipheralblood blood
27 chr9:85895800-85896600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr9:85895800-85896600 Enhancers Brain Hippocampus Middle brain
29 chr9:85895800-85896600 Enhancers Stomach Mucosa stomach
30 chr9:85895800-85896800 Enhancers Primary neutrophils fromperipheralblood blood
31 chr9:85895800-85896800 Enhancers Fetal Muscle Trunk muscle
32 chr9:85895800-85896800 Enhancers Sigmoid Colon Sigmoid Colon
33 chr9:85895800-85896800 Enhancers Osteobl bone
34 chr9:85895800-85897000 Enhancers Adipose Nuclei Adipose
35 chr9:85895800-85897000 Enhancers Brain Cingulate Gyrus brain
36 chr9:85895800-85897000 Enhancers Fetal Lung lung
37 chr9:85895800-85897000 Enhancers Ovary ovary
38 chr9:85895800-85897000 Enhancers HSMM muscle
39 chr9:85895800-85897200 Enhancers Fetal Heart heart
40 chr9:85895800-85897200 Enhancers Rectal Mucosa Donor 29 rectum
41 chr9:85895800-85897200 Enhancers Rectal Mucosa Donor 31 rectum
42 chr9:85895800-85897400 Enhancers Breast Myoepithelial Primary Cells Breast
43 chr9:85895800-85897400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr9:85895800-85898800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr9:85896000-85896600 Enhancers ES-I3 Cell Line embryonic stem cell
46 chr9:85896000-85896600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
47 chr9:85896000-85896800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr9:85896000-85897000 Flanking Active TSS NH-A brain
49 chr9:85896000-85897400 Enhancers HUES64 Cell Line embryonic stem cell
50 chr9:85896000-85897400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015