Variant report

Variant	rs73480123
Chromosome Location	chr9:73680861-73680862
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs12005748	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7025112	0.83[AMR][1000 genomes]
rs73480109	0.83[AMR][1000 genomes]
rs73647936	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042806	chr9:73613885-73686104	Enhancers Weak transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73643800-73684000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr9:73680200-73681000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr9:73680200-73681200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr9:73680600-73681000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr9:73680600-73681000	Enhancers	H9 Cell Line	embryonic stem cell
6	chr9:73680600-73681000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr9:73680800-73681000	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr9:73680800-73681400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr9:73680800-73681400	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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