Variant report

Variant	rs73481627
Chromosome Location	chr7:117601110-117601111
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs17140765	1.00[EUR][1000 genomes]
rs28377301	1.00[EUR][1000 genomes]
rs34312798	1.00[EUR][1000 genomes]
rs34329593	1.00[EUR][1000 genomes]
rs36059768	1.00[EUR][1000 genomes]
rs6961987	1.00[EUR][1000 genomes]
rs73481632	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73481655	1.00[EUR][1000 genomes]
rs981888	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869971	chr7:117420583-118274149	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:117598800-117602800	Weak transcription	Fetal Kidney	kidney
2	chr7:117599800-117601200	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr7:117601000-117601800	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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