Variant report

Variant	rs73492574
Chromosome Location	chr9:93792812-93792813
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10124819	1.00[AMR][1000 genomes]
rs12336477	1.00[AMR][1000 genomes]
rs12345699	1.00[AMR][1000 genomes]
rs12346151	1.00[AMR][1000 genomes]
rs12349860	1.00[AMR][1000 genomes]
rs59957247	1.00[AMR][1000 genomes]
rs7035017	1.00[AMR][1000 genomes]
rs73509644	1.00[AMR][1000 genomes]
rs73509648	1.00[AMR][1000 genomes]
rs73509652	1.00[AMR][1000 genomes]
rs7865699	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046989	chr9:93353987-93800416	Transcr. at gene 5' and 3' Weak transcription Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv523562	chr9:93791410-93800017	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:93788600-93794000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr9:93792200-93793600	Enhancers	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
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